Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906788.1_cds_XP_016456957.1_50736
CDS Infomation

[gene=LOC107780867] [db_xref=GeneID:107780867] [protein=patellin-3-like] [protein_id=XP_016456957.1] [location=join(39301..40671,41202..41326,41465..41606,41836..42087)] [gbkey=CDS]
Sequence

ATGGCCGAAGAAACCAAGAAACCAGCATCTGAGACTACGCCGGACACAACCCAAGAGGTT
GTCGTGTCTGATGTCCCCGTGCCGGAAAAGGAAGTCTCTACCCCTCAACCTGAACCGGTA
CCTGTCCCTGAGACGCCGGAGAAATCTACTGCTCCGGCGCCGGAGGAAAGTACTGAAGCT
GAAACTGATAAGGAAAAAGATGATGTTGCTGAATCTGCTTCGTTTAAGGAAGAGAGTAAC
AAAGTGGAAGAGCTCCCAAATCCTGAACAAAAGGCTTTAGCCGAGTTGAAACAGTTGGTT
CAAGAGGCTCTGAACAAACATGAATTCACTGCTCCGCCGCCACCCCCACCGGCCAAGGAG
GAGGAGAAAAAACTAGATGCTGAAACAGCTGAACCTACCGCTGCCGCTGTCCCAGAGGAG
GAAAAGGAAGAACATGCTGTTGCTGCTGCTGAAACTACCGCCGCCGCTGATGTACCGGCT
GAGGCCCCAGCGATAGCGGAGCCAGTGAAGGAAGAGGAGAAAAAAGAAACTCCACCACCA
GCTCCAACGGCCGTGGTGGAAGAGAAGAAAGAAACTCCACCACCAGCTCCGGCAGCGGTG
GAAGAGAAGAAAGAGGAGGAGAAAGAAATTCCACCACCAGCAGCACCGGCGGCTGCAGAG
CCATCGGAGAAAGTGACCGAAAAGGTTGCAGCAGTGGTGGAAGACGACTCTGCTAAAACC
GTGGAGGAAATAAAGGAGACAATAGTTGAAGTCACAGCCGTCGCAGCACCACAAGCACCG
GCGGAGGAACCAGCAGTTCCGGCAGCCCCAGAGGAGGAGAAACCAACCGAAGAACCAAAA
GAAGAAATCCCACCAGAAGAAGTATCCATATGGGGAATTCCCTTATTGGCTGACGAGAGG
AGTGACGTCATCCTCCTCAAGTTCCTCAGAGCCAGAGATTTCAAGGTGAAGGAAGCTTTC
GCCATGTTAAAGAGTGTCGTGGCATGGCGCAAGGAGTTCAAAATTGATGAACTTTTGGAA
GAGGATCTCTCGAGATTAGGACTAGAGAAAGTTGTGTACAATCATGGTGTTGACAAGGAA
GGACATCCAGTGTGTTACAATGCATTTGGGGCATTTCAGGATAATGAATTATACCAGAAT
ACTTTTGCTGATAAGGAGAAGATGAACAAGTTCCTTAGATGGAGAATTCAGTTCATGGAA
AAATCTATTAGGAACCTTGACTTCAGCCCTGATGGCATATGCACTTTTGTTCAGGTTATT
GATCTCAAGAATTCACCTGGACTTTACTTTTTCAAGAAAGAGCTTCGACAGGCTACCAAC
CGTGCCCTTCAATTACTCCAGGACAATTACCCTGAATTTGTAGCCAAGCAGGTGTTCATC
AATGTGCCATGGTGGTATCCAGCTTACTACAGGATGATTAATGCACTTTTCACTACAAGG
ACCAAGAGCAAGTTTGTCTTTGCTGGCCCTTCAAGATCTGCTGAGACTCTCTTCAAATAC
ATTGTCCCTGAGCAAGTGCCAGCTCAATATGGTGGACTTAGTAGGGAGGGTGAACAGGAA
TTCACCACTGCTGAGGCTGCAACTGAGGATACCATTAAGCCTACTTCCAAACACACTATT
GAATTCCCAGTTACTGAGAAGACTAGTTTGGTGTGGGAAGCTAGAGTAATAGGGTGGGAT
GTGTCCTATGGAGCAGAATTTGTGCCCAGTGCTGAAGGTGGATACACAATCATTGTGGAG
AAATCAAGAAAGGTTGCAGCAGCAGATGAAACAGTGATTACTAACACCTATACAGCAGTA
GAAGCAGGCAAAGTTGTGCTTACATTTGATAACCAAACATCTAAGAGGAAGAAGCTTCTC
TACAGGTCCAAGACCAAGCCCTCTGATTGA

Peptide Sequence

PEP ID

XP_016456957.1
PEP Infomation

PREDICTED: patellin-3-like [Nicotiana tabacum]
Sequence

MAEETKKPASETTPDTTQEVVVSDVPVPEKEVSTPQPEPVPVPETPEKSTAPAPEESTEA
ETDKEKDDVAESASFKEESNKVEELPNPEQKALAELKQLVQEALNKHEFTAPPPPPPAKE
EEKKLDAETAEPTAAAVPEEEKEEHAVAAAETTAAADVPAEAPAIAEPVKEEEKKETPPP
APTAVVEEKKETPPPAPAAVEEKKEEEKEIPPPAAPAAAEPSEKVTEKVAAVVEDDSAKT
VEEIKETIVEVTAVAAPQAPAEEPAVPAAPEEEKPTEEPKEEIPPEEVSIWGIPLLADER
SDVILLKFLRARDFKVKEAFAMLKSVVAWRKEFKIDELLEEDLSRLGLEKVVYNHGVDKE
GHPVCYNAFGAFQDNELYQNTFADKEKMNKFLRWRIQFMEKSIRNLDFSPDGICTFVQVI
DLKNSPGLYFFKKELRQATNRALQLLQDNYPEFVAKQVFINVPWWYPAYYRMINALFTTR
TKSKFVFAGPSRSAETLFKYIVPEQVPAQYGGLSREGEQEFTTAEAATEDTIKPTSKHTI
EFPVTEKTSLVWEARVIGWDVSYGAEFVPSAEGGYTIIVEKSRKVAAADETVITNTYTAV
EAGKVVLTFDNQTSKRKKLLYRSKTKPSD

Transcript Sequence

Gene sequence data has not been registered.